Antibody convergence is the presence of similar antibodies in different individuals – suggesting that the individuals have had exposure to a common antigen, which has stimulated the production of similar, antigen-specific antibodies. We want to be able to identify these shared antibodies, sometimes referred to as ‘public clones’, as it could lead to development of immunodiagnostic tests against the shared antibodies, and potentially assist in the design of vaccines and therapeutic antibodies. A recent paper on bioRxiv by Sai Reddy’s group[i] has applied deep learning techniques – variational autoencoders (VAE) and support vector machines (SVM) – to the problem of how to identify shared antibodies.
Continue readingAuthor Archives: Sarah Robinson
Invisible Women – Exposing Data Bias in a World Designed by Men
If you are looking for an excellent, data-focussed present to buy for yourself and everyone you love, check out Invisible Women – Exposing Data Bias in a World Designed by Men by Caroline Criado Perez. Having lent my copy to most members of the SABS DPhil program already, I will quote stats from this book to anyone who will listen.